Publications

Edgardo Galán Vásquez, María del Consuelo Gómez-García, Ernesto Pérez-Rueda (2022). A landscape of gene regulation in the parasitic amoebozoa Entamoeba spp. Plos One.

Regnier Cano, Alexandre Rafael Lenz, Edgardo Galán Vásquez, Jorge Humberto Prado, Ernesto Pérez-Rueda (2022). Gene regulatory network inference and gene module regulating virulence in Fusarium oxysporum. Frontiers in Microbiology.

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Cynthia Paola Rangel-Chávez, Edgardo Galán Vásquez, Azucena Pescador-Tapia, Luis Delaye, Agustino Martínez-Antonio (2021). RNA polymerases in strict endosymbiont bacteria with extreme genome reduction show distinct erosions that might result in limited and differential promoter recognition. Plos One.

Cinthia V Soberanes-Gutiérrez, Ernesto Pérez-Rueda, José Ruiz-Herrera, Edgardo Galán Vásquez (2021). Identifying genes devoted to the cell death process in the gene regulatory network of Ustilago maydis. Frontiers in Microbiology.

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Edgardo Galán Vásquez, Ernesto Pérez-Rueda (2021). A landscape for drug-target interactions based on network analysis. Plos One.

Tania Islas-Flores, Edgardo Galán Vásquez, Marco A Villanueva (2021). Screening a Spliced Leader-Based Symbiodinium microadriaticum cDNA library using the yeast-two hybrid system reveals a hemerythrin-like protein as a putative SmicRACK1 ligand. Microorganisms.

Edgardo Galán Vásquez, Beatriz Carely Luna-Olivera, Marcelino Ramírez-Ibáñez, Agustino Martínez-Antonio (2020). RegulomePA: a database of transcriptional regulatory interactions in Pseudomonas aeruginosa PAO1. Database.

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Alexandre Rafael Lenz, Edgardo Galán Vásquez, Eduardo Balbinot, Fernanda Pessi De Abreu, Nikael Souza de Oliveira, LetíCia OsóRio Da Rosa, Scheila de Avila e Silva, Marli Camassola, Aldo José Pinheiro Dillon, Ernesto Pérez-Rueda (2020). Gene regulatory networks of Penicillium echinulatum 2HH and Penicillium oxalicum 114-2 inferred by a computational biology approach. Frontiers in Microbiology.

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Domingo Martínez-Soto, John Martin Velez-Haro, Claudia Geraldine León-Ramírez, Edgardo Galán Vásquez, Bibiana Chávez-Munguía-, José Ruiz-Herrera (2020). Multicellular growth of the Basidiomycota phytopathogen fungus Sporisorium reilianum induced by acid conditions. Folia Microbiologica.

Rafael Hernandez-Guerrero, Edgardo Galán Vásquez, Ernesto Pérez-Rueda (2019). The protein architecture in Bacteria and Archaea identifies a set of promiscuous and ancient domains. Plos One.

Edgardo Galán Vásquez, Ernesto Pérez-Rueda (2019). Identification of Modules With Similar Gene Regulation and Metabolic Functions Based on Co-expression Data. Frontiers in Molecular Biosciences.

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Cynthia Rangel Chavez, Edgardo Galán Vásquez, Agustino Martínez-Antonio (2017). Consensus architecture of promoters and transcription units in Escherichia coli: design principles for synthetic biology. Molecular BioSystems.

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Edgardo Galán Vásquez, Ismael Sanchez-Osorio, Agustino Martínez-Antonio (2016). Transcription factors exhibit differential conservation in bacteria with reduced genomes. Molecular BioSystems.

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Ruth S. Pérez-Alfaro, Moisés Santillán, Edgardo Galán Vásquez, Agustino Martínez-Antonio (2014). Regulatory switches for hierarchical use of carbon sources in E. coli. Network Biology.

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Beatriz Luna, Edgardo Galán Vásquez, Edgardo Ugalde, Agustino Martínez-Antonio (2013). Structural comparison of biological networks based on dominant vertices. Molecular BioSystems.

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Edgardo Galán Vásquez, Beatriz Luna, Agustino Martínez-Antonio (2011). The regulatory network of Pseudomonas aeruginosa. Microb Informatics Exp.

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