Biological Network Lab
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E. coli
RNA polymerases in strict endosymbiont bacteria with extreme genome reduction show distinct erosions that might result in limited and differential promoter recognition
Strict endosymbiont bacteria present high degree genome reduction, retain smaller proteins, and in some instances, lack complete …
Cynthia Paola Rangel-Chávez
,
Edgardo Galán Vásquez
,
Azucena Pescador-Tapia
,
Luis Delaye
,
Agustino Martínez-Antonio
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Consensus architecture of promoters and transcription units in Escherichia coli: design principles for synthetic biology
Genetic information in genomes is ordered, arranged in such a way that it constitutes a code, the so-called cis regulatory code. The …
Cynthia Rangel Chavez
,
Edgardo Galán Vásquez
,
Agustino Martínez-Antonio
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Regulatory switches for hierarchical use of carbon sources in E. coli
In this work we study the preferential use of carbon sources in the bacterium Escherichia coli. To that end we engineered …
Ruth S. Pérez-Alfaro
,
Moisés Santillán
,
Edgardo Galán Vásquez
,
Agustino Martínez-Antonio
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Structural comparison of biological networks based on dominant vertices
It is a current practice to organize biological data in a network structure where vertices represent biological components and arrows …
Beatriz Luna
,
Edgardo Galán Vásquez
,
Edgardo Ugalde
,
Agustino Martínez-Antonio
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